CDS

Accession Number TCMCG010C28119
gbkey CDS
Protein Id XP_016538892.1
Location complement(join(135146517..135146558,135146644..135146817,135148288..135148428,135149133..135149240,135149331..135149466,135149543..135149608,135149698..135149821,135150138..135150266,135150376..135150685,135150770..135150838,135151010..135151335,135151430..135151506,135152290..135152477,135152558..135152817,135153604..135153766,135156095..135156666,135156783..135156975,135157082..135157264,135159712..135159832,135160839..135160936,135161076..135161180,135165260..135165345,135166247..135166404,135167286..135167346,135167603..135167867,135167969..135168101,135168872..135169050))
Gene LOC107839777
GeneID 107839777
Organism Capsicum annuum

Protein

Length 1488aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016683406.1
Definition PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category UY
Description Family of unknown function (DUF5311)
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14303        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAGTGGGTCGTGTATAGCAGGTATGGAGGTTCCCATTACTGGCAGCGATTCCGTCAAGTTTGTTCAACTCTCCCTTCCCTGTTCTACTTCTACTTCCACTTCAGCGGCGACCCATCTCACTAGAGACGTCGCTTCTTGCTCCATCATTGGAAACCCTCCTTCCTATTTCACTTGGAAAATTTGCAGAAGTCAGCCAAATGTCCTGGAAATAATGGAGTTCTGTGGTCATAAGGAGTTCCCAAAAATAGGACTGCAAATTGTATTCCCAGAAGCGCTTTTTCCATTTGCAGTGATCTGCAAAAATGAAATGACATTTTCTTCTGTCAAGCCATATTTGCTTCATGCCATGACAGTGTCTGGGGTTGCCTACCTTATTAAACTTGAAAAAACCTCCAATTATGTATCTAGCTCCCATTTGCAATCTGATGACTTCGTTGAGTTTAACACTCTGAGCCATCCTAATCAAGGATCAGCAACAGCAGTGACAGGAATGGCAGAATTGATGGTTGTTGGAAGAAGTGATGGATCGGTTGGGTGCTTCCAGCTTGGCATCCTTGACCAACGAGCTCCAGGCTTTGTGCAGGAACTGCGTGATGATGCTGGTCTTGGTCGTCTGTGGGGCGTTTTGTCTAGGGGAAGGTCAATCGCTGCAGTGCATGATCTAGTAATATCAGAGTTCCACCAGAAAAAGCTTCTATTTGTGCTTCACTCTGATGGGAGCTTGCGTGTGTGGGACCTTTCAAATCGTTCCAGAATTTTCAGTCATTCCTTAAGTGTATCACCATCCGCAGGATCAACATTTGTAAAGATATGTGTGGGAAGCGACCACAACAATCCTGATGTAATTCCTCTGGCAGTACTACAAAAAGATGATTCAGAAGTTGGCACCGCGGTGATCTCTTTATATAGCCTTTATATCAGTATTGGGGACAGAATAAACTTGTTACTCGATCCTTTGACAAAAAGCATCTCGTTGGAAGAGGGTGACCTCATTGATGTGAAACTTACTCCAAACAAGTTGTGGATACTCAGAGAAAATGGATTGGTACTGAAGGAGTTGTTTTATCAAAATAGTAAAGAGGAATTATCTTATTTCTATTCTTTACAGGATGCATTTGTTGCAGAGCAGCTGTTTCAAGGCTCTGAAAATTCTTCAGATGATCTACTTTGGCTTTCTCACACAGTTTTGTCATCTTCAAAGGATCAAATTTCTCCATTTGTATCCTCTGTTTACTTGCGTAGGTTGCTCCTTCCGGGTGTTTATCATAGAAATGTTCTTCGGGTAACATTACGAGATTTTAGCAAGCACTTCACTGATTCTGAATTTGACTCTCTGACTGTTGATGGACTGAAAAATGAAATTCTGTCGGTTATTCAACACGAGGTGGGAGCTGATAGTCCAATTTCAGTACTTCAGAGCTGGAAAACCTTTTGTACTTGTTATTTCAGTAATTGGTGTAGAGCAAATGTAGCGTGTGGTTTGCTTATTGATTCTGCTACACAAGCTGTGGGTGTGATTAGAAAAAGCTCAGTCTCCATGTGTCGTAGTCTAGAGGACATAGAGCTTCTTGTTTTTGGGTCTTCTGATGAACATGGAAATATAATACGCTCTAGGTTTGACTCCTCTGATAGTGATCTTGAATGGGAAATTCTTTTGGAGATACTGCAGTGTGTTAATAATCTGAGTCAACAGTTGAGCAAAGCTGCTCCTGCCATATTTTACGAGTCTCTTATTAGAACACCAAATTTTTCGTCGGAAGAGGTCATTCCTCGGTTGCTGAAAAATTTAGAAAGTGGATATAGCTCATCAGTGGCAGCTCTCCACATACCCGAACTTGGAACTGATGTAGCATTGGATAAGGAAATTTCCTACCACAAACGACTCAGAAAATTCTCGGTAGATATGTTTTTATCCCTGCACAATTTGTGCAGTAGAGCTACCAGATGGGGGAGCGTTTTGCATGTTATTGAGAGCTACTTGAAATTTCTGGTGCCTCAAAAATATGAACATAACTTGGATTCTGAAGGACTTTTCGCTGTCAGCACTGCCCTTACAGTGCAGGCGACTTCTCAAGTTGCTAAAGTGATGTTTGAATCTGCATTGGACGTGCATTTGCTTCTAAGCTACATGGTTAACAGTAGCAGTCAGATTGGCATGTCAGAGGATGAGGTTTCAAGAGTAAAACTTGAGTTAGTTCCAATGATCCAAGAGGTTCTTACTGATTGGCATATCATTTATTTCTTCTGTACAACACCATCTGAATCTCCTCTTCTTGAAGACTTCAGCAGTCAACTTTCATCTTTACAGCTTGATGGAAATGTTGATCGGAGATCATGGAATGAGAAACTTGGTAAATCTGAATTCACATTGGCCTTTATTTTGTTACTTGGAGGTCATGGTGGGCCATCTCTTGGACATCTTCCTGATCCCAGCAGTCTAAGTAAATCAGTACAAGAATTTGTTAGCTGGATAATATGGGGGAGAACTGGTGCAGAACCATCTGTTTTCTTCACTCACTCAATTGGCCTTGCTCTGACGTTGCTTAGACATGGGCAATACGATGCTGTTGAGTATGTACTCAGTTTGGTGGATTCTTATTCACGCAAGGAGAAGATTTGCCAAAGTCTTCAGAGCGATGGTGGGGTGTGGTCCACTCTGTTGCATCTTCTTGGTTGTTGCTTTATTGCTCAAAGCCAACGTGGTTTGCATGGAACAATGAAAGAACGGAAAACTTCTGAAGCAATGCGGTGCTTTTTTAGAGCTGCGTCTGTGGAAGGAGCTGCCAAGGCTTTGCAAAGTTTGCCAAATGAAGCGGGATGGATACACCTTGGTTTCTCTCAACAAGTCACACCTGCTGCTTGGAAGCTTCATTACTATCAATGGGCAATGCAAATATTTGAACAACATAACATGAGGGAGGCTGCCTGCCAGTTTGCGCTTGGTGCACTTGAGCAAGTTGATGAAGCTCTTGGATCTGGTGTTCTTGATGAATCAGCAACTGTTGTCAAGGGACGTCTTTGGGCAAATGTCTTCAAGTTCACTTTAGATCTAAACTATTACTATGATGCGTATTGCGCAATCATTTCAAATCCAGATGAAGAAAGCAAAACCATTTGCCTGAGGCGTTTTATAATTGTTCTATATGAGCGAGGAGCTGTGAAGATTCTTTGCAATGGGCAGCTACCATTTATTGGCTTGTCAGAGAAAGTGGAGCGAGAGCTTGCTTGGAAGGCTGAGCGTTCAGATGTTTCAGCCAAGCCAAACCCATTCAAGTTGCTCTATGCATTTGCAATGCAGAGACATAATTGGCGGAGTGCAGCAAGCTATATTTACTTGTATTCAGCGCAATTAAGAATCCATGGTGCAATGAGAGATCCCCAACGACGATCCTTCATTCTGCAGGAGAGGCTGAATGGGCTTTCTGCTGCTATCAATGCTCTGCAGCTGGTTCATCCTGCATATGCTTGGATTGATTCTCCACTTGAGGATACCTCTAATATGTATCCAAGTAAAAAGGCTAGGATAACCATGGAAGAACAGTCTCCTGGTAATGGTGCTCAGTCTCAAAGGCGAAGGTCATATTTAGATGTTGGAAAACTTGAGAATGAGTTCATTCTCACGTCAGCTGAATATTTGCTATCATTGGCAAATGTCACTTGGACTTTTGCTATTTTTCTTCTTTCAGGAATCGAGGCACCCTCAACTGATGTGATTGACCTTTTGGTTGAATCAAGCTTGTATGATATGGCTTTCACAGTGATTCTAAAATTTTGGAAAGGGTCGGCTTTGAAGAGGGAGCTTGAAAGAGTTTTTGCAGCTATTTCAGTGAAATGCTGTCCAAAGAAAGCCCCATCAGTTGGGAATGGTCAGAAGATGCAGACTCTTCTTTTGACTTCATCACAAAATGAGATTGTTGTCCATGAATCTCCTAATGTTGGTCCACCTGCACAGGAATCTAAAGGCAGTAGTCATTGGGAGACACTTGAGCTCTATCTTGAAAAATACAAAAAGTTTCATGCTAAATTGCCTATTATTGTTGCTGATACTCTTCTTGCTGCTGATCCTCAAATTGAGTTGCCTCTTTGGTTGGTTCAAATGTTCAAGGACGTGCCAGCAAAAAGTGGTGGAGGAATGGCGGGAAGTGAGTCCAACCCTGCTTCTTTGTTTCGGCTATATATTGACTTTGGTCGTTATACTGAAGCGACTAATCTGCTTCTGGAGTACATTGAATCCTTTGCCTCTCTGAGACCAGCTGATATTATCCGTCGTAAAAAGCCATTTGCAGTTTGGTTTCCCTATTCTTTGATTGAGCGTTTATGGTGTCAACTTCAACTATCTATCAAACTTGGCCACATGGTTGATCAAAGCGAAAAGCTTAAAAAGTTGTTACAGGGCGCTCTCATGAACCATCTACATCAACTTAAAGTGGATTCAGATGATGTGATGTCTGCTGTTGCCTAG
Protein:  
MGSGSCIAGMEVPITGSDSVKFVQLSLPCSTSTSTSAATHLTRDVASCSIIGNPPSYFTWKICRSQPNVLEIMEFCGHKEFPKIGLQIVFPEALFPFAVICKNEMTFSSVKPYLLHAMTVSGVAYLIKLEKTSNYVSSSHLQSDDFVEFNTLSHPNQGSATAVTGMAELMVVGRSDGSVGCFQLGILDQRAPGFVQELRDDAGLGRLWGVLSRGRSIAAVHDLVISEFHQKKLLFVLHSDGSLRVWDLSNRSRIFSHSLSVSPSAGSTFVKICVGSDHNNPDVIPLAVLQKDDSEVGTAVISLYSLYISIGDRINLLLDPLTKSISLEEGDLIDVKLTPNKLWILRENGLVLKELFYQNSKEELSYFYSLQDAFVAEQLFQGSENSSDDLLWLSHTVLSSSKDQISPFVSSVYLRRLLLPGVYHRNVLRVTLRDFSKHFTDSEFDSLTVDGLKNEILSVIQHEVGADSPISVLQSWKTFCTCYFSNWCRANVACGLLIDSATQAVGVIRKSSVSMCRSLEDIELLVFGSSDEHGNIIRSRFDSSDSDLEWEILLEILQCVNNLSQQLSKAAPAIFYESLIRTPNFSSEEVIPRLLKNLESGYSSSVAALHIPELGTDVALDKEISYHKRLRKFSVDMFLSLHNLCSRATRWGSVLHVIESYLKFLVPQKYEHNLDSEGLFAVSTALTVQATSQVAKVMFESALDVHLLLSYMVNSSSQIGMSEDEVSRVKLELVPMIQEVLTDWHIIYFFCTTPSESPLLEDFSSQLSSLQLDGNVDRRSWNEKLGKSEFTLAFILLLGGHGGPSLGHLPDPSSLSKSVQEFVSWIIWGRTGAEPSVFFTHSIGLALTLLRHGQYDAVEYVLSLVDSYSRKEKICQSLQSDGGVWSTLLHLLGCCFIAQSQRGLHGTMKERKTSEAMRCFFRAASVEGAAKALQSLPNEAGWIHLGFSQQVTPAAWKLHYYQWAMQIFEQHNMREAACQFALGALEQVDEALGSGVLDESATVVKGRLWANVFKFTLDLNYYYDAYCAIISNPDEESKTICLRRFIIVLYERGAVKILCNGQLPFIGLSEKVERELAWKAERSDVSAKPNPFKLLYAFAMQRHNWRSAASYIYLYSAQLRIHGAMRDPQRRSFILQERLNGLSAAINALQLVHPAYAWIDSPLEDTSNMYPSKKARITMEEQSPGNGAQSQRRRSYLDVGKLENEFILTSAEYLLSLANVTWTFAIFLLSGIEAPSTDVIDLLVESSLYDMAFTVILKFWKGSALKRELERVFAAISVKCCPKKAPSVGNGQKMQTLLLTSSQNEIVVHESPNVGPPAQESKGSSHWETLELYLEKYKKFHAKLPIIVADTLLAADPQIELPLWLVQMFKDVPAKSGGGMAGSESNPASLFRLYIDFGRYTEATNLLLEYIESFASLRPADIIRRKKPFAVWFPYSLIERLWCQLQLSIKLGHMVDQSEKLKKLLQGALMNHLHQLKVDSDDVMSAVA